Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTGTTTGTGGGGGGTGTGCCAGGC
.((((((((((..(.((.(...&.).)).)..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001388185
GeneSymbolJADE2
Binding site5883,5910
Score0.923
Seed1
Au0.456
Energy-20.1
Binding len20
Me-9.165
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure