Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCAGCACATGCCGGGA
.((((((((....((((.(...&).))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001388367
GeneSymbolNBPF9
Binding site4640,4659
Score0.846
Seed1
Au0.544
Energy-17.4
Binding len19
Me-12.497
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure