Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGGCGGCCGCGTCTTCTGCGT
.(((((.(((((((((..(((&)))...)))))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352514
GeneSymbolHLCS
Binding site188,213
Score0.846
Seed0
Au0.353
Energy-21.5
Binding len25
Me-5.337
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure