Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCACAGTTCGACCTGCGGCTGCT
..(((((((((((((..((((&))))........))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001388386
GeneSymbolSREBF1
Binding site3608,3635
Score0.846
Seed1
Au0.338
Energy-23.6
Binding len27
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure