Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCCTCAGCTGTGAC
(((((((((.(((..(((((.&)))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352515
GeneSymbolHLCS
Binding site1409,1428
Score0.846
Seed1
Au0.529
Energy-21.1
Binding len19
Me-6.772
Phylopstem-0.4678975555555556
Phylopflank-0.9645953922499997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure