Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCCTGAGCCAAGCTGCAT
.((((((((((((((.((((.&)))))))))...))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001388408
GeneSymbolWSCD1
Binding site2923,2947
Score0.846
Seed1
Au0.397
Energy-22.3
Binding len24
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end6
Position3UTR
2D Structure