Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGGTTGTTGCCAGGTT
((((((((.(((((((((....&))))..))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001388492
GeneSymbolHTT
Binding site9867,9887
Score1.0
Seed1
Au0.456
Energy-21.1
Binding len20
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure