Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTTCAGAAAGTGGCAGTGA
(((((.(..((((((((((...&)))..))))))).).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001352533
GeneSymbolPTPN20
Binding site207,228
Score0.846
Seed0
Au0.471
Energy-20.0
Binding len21
Me-9.209
Phylopstem-0.09117913333333329
Phylopflank-0.2863816775
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end5
Position5UTR
2D Structure