Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCGGAACTTCTCTTTCTTAGAAATCTCATTTACAACCGTATGCAT
.((((..((((((((((((..&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001388498
GeneSymbolOR6C3
Binding site282,330
Score0.846
Seed0
Au0.588
Energy-19.5
Binding len18
Me-7.238
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure