Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCCCCGCAGCAGGCAT
.(((.(((((((..(((.(((&))).))).)))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001389
GeneSymbolDSCAM
Binding site628,649
Score0.923
Seed0
Au0.353
Energy-22.6
Binding len21
Me-10.058
Phylopstem-0.37726704285714285
Phylopflank-0.3721161049999999
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure