Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGATTGCAGCTTGGCT
..((((((((((((((.....&))))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352533
GeneSymbolPTPN20
Binding site960,977
Score1.0
Seed1
Au0.603
Energy-18.7
Binding len17
Me-4.957
Phylopstem0.4588145625
Phylopflank0.43610458350000003
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end3
Position3UTR
2D Structure