Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTCAGCCATCAGCTGCAC
.((((((((.(((((..(((.&))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001389264
GeneSymbolSYNPO2
Binding site2068,2087
Score0.923
Seed1
Au0.456
Energy-20.0
Binding len19
Me-5.269
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure