Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTACAACTTCAGCTGGGC
.(.((((((.((((((.((((&)))))))))).)))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001389264
GeneSymbolSYNPO2
Binding site5035,5055
Score0.846
Seed0
Au0.5
Energy-19.6
Binding len20
Me-6.593
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure