Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAACAGTTGCTGG
...((((.((.((((((((((&)))))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001389628
GeneSymbolEXT2
Binding site3394,3413
Score1.0
Seed0
Au0.706
Energy-20.1
Binding len19
Me-11.653
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure