Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTTGACTCTCATTCACAGCAACTGCAGCA
.....(((((((((((.....&.))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001389643
GeneSymbolUSP29
Binding site1217,1250
Score1.0
Seed0
Au0.471
Energy-20.1
Binding len13
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure