Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTGCAGAGGGCGGCTGTAC
.(((((((((..((((((((.&))).)))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001390
GeneSymbolDTNA
Binding site4090,4112
Score0.923
Seed1
Au0.441
Energy-20.8
Binding len22
Me-9.965
Phylopstem-0.2530556655555556
Phylopflank0.12635029075
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure