Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGCCAAAAAGGCAGCTGCC
..(((((((((((((..(((.&))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001391974
GeneSymbolSPRN
Binding site864,887
Score0.846
Seed1
Au0.382
Energy-22.1
Binding len23
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure