Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAGCTGCAGCAGCGGC
((((.((((((((((((....&)))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001391983
GeneSymbolTRERF1
Binding site1517,1535
Score1.0
Seed0
Au0.441
Energy-23.8
Binding len18
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure