Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCAGCCTCTGCT
..((((..((((((((.....&)))))).))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001392
GeneSymbolDTNA
Binding site26,42
Score0.846
Seed0
Au0.382
Energy-16.7
Binding len16
Me-8.814
Phylopstem2.5521372222222225
Phylopflank2.842522725
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end3
Position5UTR
2D Structure