Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCAAGCCGCAGAGAGCATCTGCTGCCGAGGCCAATAGGAGCCGTGTGT
(((((((((((.(((.(((((.&.))))).))).....)))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001352600
GeneSymbolLIG4
Binding site174,225
Score0.923
Seed1
Au0.426
Energy-26.5
Binding len28
Me-7.517
Phylopstem0.23260836666666673
Phylopflank-0.09499778249999996
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end6
Position5UTR
2D Structure