Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACTGCCGCCGACGTCCTGGACCTGCAGCTGCC
..((((((((((((...(((.&.))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001393404
GeneSymbolTTC28
Binding site5208,5243
Score0.846
Seed1
Au0.338
Energy-23.1
Binding len19
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure