Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCTGGTGTCCGAGTGGACAGTGG
(((((((((....(((((((((&))))))))).....))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001352606
GeneSymbolPCCA
Binding site1158,1185
Score0.923
Seed1
Au0.529
Energy-21.3
Binding len27
Me-12.641
Phylopstem3.0118122222222223
Phylopflank4.769813224999998
Longest consecutive pairings9
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure