Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTAGACAGCTGCAAGCTGA
...(((((((((((((..(((&)))..))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001393549
GeneSymbolMCTP1
Binding site165,185
Score1.0
Seed0
Au0.632
Energy-22.1
Binding len20
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure