Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGCGGGAAAGGAGCAGTT
.(((.((((((((((.(.(...&).).))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001352659
GeneSymbolPCM1
Binding site221,239
Score0.923
Seed0
Au0.559
Energy-21.2
Binding len18
Me-8.145
Phylopstem0.25105571000000004
Phylopflank0.674181875325
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure