Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTTACAACAGCAGGAGCAAC
((((..((((.(((((((.((&)).))))))).))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352659
GeneSymbolPCM1
Binding site1263,1285
Score0.923
Seed0
Au0.574
Energy-20.9
Binding len22
Me-12.782
Phylopstem5.864744285714286
Phylopflank4.92036318375
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure