Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCTCCGAGCTGCC
..((((((.(((..(.((((.&))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001393661
GeneSymbolLCN9
Binding site1178,1194
Score0.923
Seed1
Au0.368
Energy-18.2
Binding len16
Me-8.392
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure