Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGGGGCTGCAGCTGG
...(((((((((((.((((((&))))).).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001393888
GeneSymbolPLIN4
Binding site4348,4368
Score0.846
Seed0
Au0.324
Energy-24.9
Binding len20
Me-7.25
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure