Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGAGGGGCAGCAGCTGCT
..((((((((.(((.(..(((&)))..).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352681
GeneSymbolTMEM18
Binding site492,512
Score0.808
Seed1
Au0.441
Energy-21.6
Binding len20
Me-8.517
Phylopstem-0.06693700000000001
Phylopflank0.0018939025000000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure