Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAACTCCTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGA
.(((((((((...(((......&.)))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001393951
GeneSymbolPPFIA4
Binding site6199,6252
Score0.923
Seed1
Au0.441
Energy-17.9
Binding len16
Me-11.254
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure