Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCTTCCGGCCGCGGGAGCAC
.(((..(((((((((.(((((&)).))).)))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001393951
GeneSymbolPPFIA4
Binding site3909,3931
Score0.846
Seed0
Au0.25
Energy-22.2
Binding len22
Me-10.046
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure