Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTTTTGGTGCTGCCTGTTGTGGAAGCAGTAGAAGCCGGTGA
((((((((.((((((((((((.&.)))))).....)))).....)).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001352688
GeneSymbolSMIM30
Binding site192,236
Score0.923
Seed1
Au0.485
Energy-22.2
Binding len33
Me-4.994
Phylopstem0.11400566818181818
Phylopflank0.34306037000000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure