Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGCTACTGATGTCAGGG
.((((((((.((..((((..((&))..)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001352702
GeneSymbolPTK2
Binding site456,475
Score0.846
Seed1
Au0.529
Energy-16.3
Binding len19
Me-7.182
Phylopstem0.207262125
Phylopflank0.15059718125000005
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure