Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCTGTGTGGCCGCAGACTGG
...(((((((((((((((((.&)))))).....)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394000
GeneSymbolXBP1
Binding site66,90
Score0.846
Seed0
Au0.412
Energy-21.0
Binding len24
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure