Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGCCGCGGAAGCGAC
((((..(((((((((..(((.&))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394014
GeneSymbolCDC42BPA
Binding site164,183
Score0.923
Seed0
Au0.25
Energy-22.1
Binding len19
Me-10.191
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end5
Position5UTR
2D Structure