Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGCATCTAGCAAAATAATGGCAGCTGCT
..((((((((.(((((.((((&)))).)))............)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352702
GeneSymbolPTK2
Binding site259,291
Score0.846
Seed1
Au0.544
Energy-22.2
Binding len32
Me-7.782
Phylopstem0.6371283124999999
Phylopflank0.47885884125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure