Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCATGACCATCCGGCTGCGAC
(((((((((.((((((((((.&)))).))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394024
GeneSymbolPTPRT
Binding site1533,1557
Score1.0
Seed1
Au0.353
Energy-23.1
Binding len24
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure