Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCCGGCTGTGAA
(((((((((.((((((.....&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394037
GeneSymbolSHF
Binding site2194,2210
Score0.974
Seed1
Au0.5
Energy-21.2
Binding len16
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure