Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCCGCCTACAGGCTGCAGC
((((((((((((((...(((.&))))))))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394037
GeneSymbolSHF
Binding site293,316
Score0.846
Seed1
Au0.279
Energy-21.1
Binding len23
Me-4.906
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end4
PositionCDS
2D Structure