Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTAACCGAGTCGGCTGCT
..(((((((((((((..(((.&)))..))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394057
GeneSymbolRAET1E
Binding site2569,2591
Score0.923
Seed1
Au0.368
Energy-22.2
Binding len22
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure