Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCAGCCTCAGCAGCCCTGCT
..(((((((((((((((((((&))))))).))))...)))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352750
GeneSymbolPTK2
Binding site882,908
Score0.846
Seed1
Au0.412
Energy-23.6
Binding len26
Me-4.957
Phylopstem1.6525087839999995
Phylopflank1.7208819750000002
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end8
PositionCDS
2D Structure