Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAAACTACCTTAGCTGCAT
.((((((((.(((.((.(((.&)))..)).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352750
GeneSymbolPTK2
Binding site1735,1756
Score0.846
Seed1
Au0.574
Energy-20.2
Binding len21
Me-5.893
Phylopstem4.8761975
Phylopflank5.227180283250002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure