Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCAGCGGCTGCAGCG
.....(((((((((((..(((&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352750
GeneSymbolPTK2
Binding site194,212
Score0.821
Seed0
Au0.456
Energy-19.9
Binding len18
Me-13.666
Phylopstem-1.8663753636363636
Phylopflank-0.733077387375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure