Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAACGGCAAGCAGCTGTG
..((((((((.(((((..(((&))).)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394165
GeneSymbolSMIM35
Binding site103,123
Score0.923
Seed1
Au0.426
Energy-21.4
Binding len20
Me-7.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure