Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACTAAAGGGAGCCCTCAGCTGCAC
.((((((((.(((((((((..&))))).......))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394165
GeneSymbolSMIM35
Binding site1990,2017
Score0.846
Seed1
Au0.5
Energy-20.2
Binding len27
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure