Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCTGCTGACCTCGGCTGCT
..(((((((.((((((((((.&))))))....)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394232
GeneSymbolS100A5
Binding site638,661
Score0.923
Seed1
Au0.353
Energy-22.0
Binding len23
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure