Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCCGACTGCAGAGTGGGATGAACTTGCAGA
(((((((((((((((..(((.&)))..)))))))))............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394294
GeneSymbolSCHIP1
Binding site416,449
Score0.846
Seed1
Au0.485
Energy-20.0
Binding len33
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings19
Pairings in 3prime end5
PositionCDS
2D Structure