Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AACAGCAGCTGCC
..((((((((.(((.......&))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394294
GeneSymbolSCHIP1
Binding site4,17
Score0.923
Seed1
Au0.391
Energy-18.1
Binding len13
Me-8.75
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure