Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGCACTGCCTCAGCTGTG
..(((((((.((((((..(((&)))..)))..))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394308
GeneSymbolSCMH1
Binding site1642,1664
Score0.846
Seed1
Au0.412
Energy-20.5
Binding len22
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure