Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACTCCTAGCCACAGCTGCC
..(((((((.(((((...(((&))).....))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394308
GeneSymbolSCMH1
Binding site2153,2175
Score0.923
Seed1
Au0.441
Energy-20.5
Binding len22
Me-6.433
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure