Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAGTGGCAGCTGTT
..((((((((.((((((....&)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394324
GeneSymbolSPIRE1
Binding site2590,2606
Score0.846
Seed1
Au0.456
Energy-20.2
Binding len16
Me-7.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure